Environmental adaptability and stress tolerance of Laribacter hongkongensis: a genome-wide analysis

Cell & Bioscience

Table 5 CDSs related to transcription in L. hongkongensis, N. meningitidis, N. gonorrhoeae and C. violaceum

Product	Gene	*L. hongkongensis* HLHK 9	*N. meningitidis* MC58	*N. gonorrhoeae* FA1090	*C. violaceum* ATCC12472
ATP-dependent helicase	hrpA	+	+	+	+
ATP-dependent RNA helicase	rhlE	+	+	+	+
DNA-directed RNA polymerase (alpha subunit)	rpoA	+	+	+	+
DNA-directed RNA polymerase (beta subunit)	rpoB	+	+	+	+
DNA-directed RNA polymerase (beta subunit)	rpoC	+	+	+	+
DNA-directed RNA polymerase (omega subunit)	rpoZ	+	+	+	+
RNA helicase	dbpA	-	-	-	+
Sigma factor 32	rpoH	+	+	+	+
Sigma factor 38	rpoS	+	-	-	+
Sigma factor A (sigma 70)	rpoD	+	+	+	+
Sigma factor E (sigma 24)	rpoE	+	+	+	+
Sigma factor for flagellar operon	fliA	+	-	-	+^a
Sigma factor N (sigma 54)	rpoN	+	+	+	+
Transcription elongation factor GreA	greA	+	+	+	+
Transcription elongation factor GreB	greB	+	+	+	+
Transcription termination factor Rho	rho	+	+	+	+
N utilization substance protein A	nusA	+	+	+	+
N utilization substance protein B	nusB	+	+	+	+
Transcription anti-termination protein NusG	nusG	+	+	+	+

ISSN: 2045-3701